Difference between revisions of "Csc334 Labs"

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=CSC334 Labs=
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<meta name="keywords" content="computer science, bioinformatics, DNA, CSC334, Lab" />
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<meta name="description" content="DNA Sequence Logo Lab" />
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<meta name="title" content="Bioinformatics Lab" />
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<meta name="abstract" content="DNA RNA Labs" />
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<meta name="author" content="thiebaut at cs.smith.edu" />
  
* [[CSC334_Lab1 | Lab #1]]
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[[Csc334_Labs | Back to CSC334 Homepage]]
* [[CSC334_Lab2 | Lab #2]]
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<hr>
* [[CSC334_Lab3 | Lab #3]]
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=BioInformatics Labs=
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* [[CSC334_Lab0 | Lab #0]]: Introduction to '''Proce55ing'''
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* [[CSC334_Lab1 | Lab #1]]: Retrieving '''DNA''' sequence from database
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* [[CSC334_Lab2 | Lab #2]]: Retrieving '''protein''' sequence from database
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* [[CSC334_Lab3 | Lab #3]]: '''Aligning''' sequences in Proce55ing
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* [[CSC334_Lab4 | Lab #4]]: Finding '''repeats''' in DNA sequences with Proce55ing
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* [[CSC334_Lab5 | Lab #5]]: Finding '''repeats''' in DNA sequences using a Web-server
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* [[CSC334_Lab6 | Lab #6]]: Playing with '''FoldIt'''!
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* [[CSC334_lab7 | Lab #7]]: '''Sequence Logos''' with ''Proce55ing''
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* [[CSC334_Lab8 | Lab #8]]: '''Sequence Logos''' on the Web
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* [[CSC334_Lab9 | Lab #9]]: '''Where/How do I get proteins?'''
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* [[CSC334_Lab10 | Lab #10]]: Finding the '''secondary structure''' of a protein
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=Miscellaneous Links and Resources=
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* [[CSC334_EColi | E Coli]] sequence in FASTA format
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* A good tutorial [[Image:ProcessingTutorial.pdf | Link ]] on Processing by Josh Nimoy, from NYU.
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<hr>
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[[CSC334 | CSC334 Home]]

Latest revision as of 12:07, 30 September 2008

<meta name="keywords" content="computer science, bioinformatics, DNA, CSC334, Lab" /> <meta name="description" content="DNA Sequence Logo Lab" /> <meta name="title" content="Bioinformatics Lab" /> <meta name="abstract" content="DNA RNA Labs" /> <meta name="author" content="thiebaut at cs.smith.edu" />

Back to CSC334 Homepage


BioInformatics Labs

  • Lab #0: Introduction to Proce55ing
  • Lab #1: Retrieving DNA sequence from database
  • Lab #2: Retrieving protein sequence from database
  • Lab #3: Aligning sequences in Proce55ing
  • Lab #4: Finding repeats in DNA sequences with Proce55ing
  • Lab #5: Finding repeats in DNA sequences using a Web-server
  • Lab #6: Playing with FoldIt!
  • Lab #7: Sequence Logos with Proce55ing
  • Lab #8: Sequence Logos on the Web
  • Lab #9: Where/How do I get proteins?
  • Lab #10: Finding the secondary structure of a protein

Miscellaneous Links and Resources


CSC334 Home