Difference between revisions of "CSC334 Lab8"

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=Logos on the Web=
 
=Logos on the Web=
  
==Input==
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==Berkeley Logo Generator==
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Point your browser to [http://weblogo.berkeley.edu  weblogo.berkeley.edu], which is one of the currently better logo generators on the Web.
 
Point your browser to [http://weblogo.berkeley.edu  weblogo.berkeley.edu], which is one of the currently better logo generators on the Web.
  
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<br / >
 
<br / >
 
   
 
   
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==http://www.cbs.dtu.dk/~gorodkin/appl/plogo.html
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Another option is to point your browser to [http://www.cbs.dtu.dk/~gorodkin/appl/plogo.html www.cbs.dtu.dk/~gorodkin/appl/plogo.html], and to enter the same eight sequences, as illustrated below:
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[[Image:cbsLogoInputWindow.png]]
  
  

Revision as of 17:56, 4 August 2008

<meta name="keywords" content="computer science, bioinformatics, DNA, CSC334, Lab" /> <meta name="description" content="DNA Sequence Logo Lab" /> <meta name="title" content="Bioinformatics Lab" /> <meta name="abstract" content="DNA Sequence Logo" /> <meta name="author" content="thiebaut at cs.smith.edu" />

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WebLogoOutput.png


Introduction

This lab should be done in conjunction with Lab 7 dealing with DNA sequence logos. Please refer to the introduction section of Lab 7 for more information on sequence logos.

Logos on the Web

Berkeley Logo Generator

Point your browser to weblogo.berkeley.edu, which is one of the currently better logo generators on the Web.

Enter the 8 sequences of Lab 7 in the input window, and click on the Create button:

Input form of WebLogo Web site

Compare the output to the one you obtained in Lab 7.

Output of WebLogo


==http://www.cbs.dtu.dk/~gorodkin/appl/plogo.html

Another option is to point your browser to www.cbs.dtu.dk/~gorodkin/appl/plogo.html, and to enter the same eight sequences, as illustrated below:

CbsLogoInputWindow.png






Back to lab page