Difference between revisions of "Csc334 DT lab Ideas"
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* Get a DNA sequence [[CSC334_Lab1| Lab #1]] | * Get a DNA sequence [[CSC334_Lab1| Lab #1]] | ||
| + | * Get a protein sequence [[CSC334_Lab3 | Lab #2]] | ||
* given a series of nucleotides, find and display the 6 reading frames | * given a series of nucleotides, find and display the 6 reading frames | ||
* finding repeats within a sequence | * finding repeats within a sequence | ||
Revision as of 17:51, 21 July 2008
- Get a DNA sequence Lab #1
- Get a protein sequence Lab #2
- given a series of nucleotides, find and display the 6 reading frames
- finding repeats within a sequence
- BLAST lab: take a sequence (protein and/or DNA) and find other sequences that are close to it
- given N sequences that overlap, find the best way in which they form a long sequence. Use processing and a circle approach to represent them
- display alignment of two sequences
- limit to end to end overlapping
- from output of blast
- from result of computing local alignment
