Difference between revisions of "Csc334 DT lab Ideas"
| Line 3: | Line 3: | ||
* Get a DNA sequence [[CSC334_Lab1| Lab #1]] | * Get a DNA sequence [[CSC334_Lab1| Lab #1]] | ||
| − | * Get a protein sequence [[ | + | * Get a protein sequence [[CSC334_Lab2 | Lab #2]] |
* given a series of nucleotides, find and display the 6 reading frames | * given a series of nucleotides, find and display the 6 reading frames | ||
* finding repeats within a sequence | * finding repeats within a sequence | ||
Revision as of 17:54, 21 July 2008
- Get a DNA sequence Lab #1
- Get a protein sequence Lab #2
- given a series of nucleotides, find and display the 6 reading frames
- finding repeats within a sequence
- BLAST lab: take a sequence (protein and/or DNA) and find other sequences that are close to it
- given N sequences that overlap, find the best way in which they form a long sequence. Use processing and a circle approach to represent them
- display alignment of two sequences
- limit to end to end overlapping
- from output of blast
- from result of computing local alignment
