Difference between revisions of "Csc334 DT lab Ideas"
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* [[Image:FoldIt.png | left | thumb | 100px ]] | * [[Image:FoldIt.png | left | thumb | 100px ]] | ||
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| − | FoldIt! [http://fold.it/portal/adobe_main http://fold.it] | + | FoldIt! [http://fold.it/portal/adobe_main http://fold.it]. Read NYT Article |
| + | [http://www.nytimes.com/2008/07/22/science/22inno.html?pagewanted=all If You Have a Problem, Use Innocentive to Ask Everyone] for background. | ||
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Revision as of 08:10, 24 July 2008
- Get a DNA sequence Lab #1
- Get a protein sequence Lab #2
- given a series of nucleotides, find and display the 6 reading frames
- finding repeats within a sequence
- BLAST lab: take a sequence (protein and/or DNA) and find other sequences that are close to it
- given N sequences that overlap, find the best way in which they form a long sequence. Use processing and a circle approach to represent them
- display alignment of two sequences
- limit to end to end overlapping
- from output of blast
- from result of computing local alignment
FoldIt! http://fold.it. Read NYT Article
If You Have a Problem, Use Innocentive to Ask Everyone for background.
