Csc334 DT Notes

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Notes taken by DT, Summer of 08

Source Bioinformatics for Dummies

  • Bioinformatic tools (p. 27) mainly fit in 3 categories
    • Sequence alignment
    • Phylogenetic and classification methods
    • Display tools
  • Some bioinformatic tasks (could be labs)
    • finding which genomes are available
    • analyzing sequences in relation to specific genomes
    • displaying genomes
    • ORFing: parsing a microbial genome sequence
    • GenScan: parsing a eukaryotic genome sequence
    • finding orthologous and paralogous genes
    • finding repeats
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